BIOSCI 746 : The Molecular Machinery of The Cell
2023 Semester Two (1235) (15 POINTS)
Proteins are nature’s robots - the self-operating nano-scale machines on which all cellular biology depends. As proteins function, they may interact with other molecules, undertake directed and non-directed movement, promote chemical reactions, become chemically modified, and fluctuate significantly in conformation. This paper addresses the experimental investigation and modeling of such basic molecular processes, which can explain the biological activities of proteins, and facilitate protein engineering. The first half of the course develops some of the needed theory, and the second half of the course is focused on practical applications.
This course leads on from the undergraduate Biochemistry and Cell Biology Pathway in Biological Sciences. Students planning a research career in molecular biology, biochemistry, biophysics, or structural biology will find this paper develops many of the skills needed in these fields.
Capabilities Developed in this Course
|Capability 1:||Disciplinary Knowledge and Practice|
|Capability 2:||Critical Thinking|
|Capability 3:||Solution Seeking|
|Capability 4:||Communication and Engagement|
|Capability 5:||Independence and Integrity|
- Comprehend, analyze and explain some simple physical models that describe protein behaviour (Capability 1, 2, 3, 4 and 5)
- Comprehend, analyze and explain some of the experimental techniques we use to probe protein behavior. (Capability 1, 2, 3, 4 and 5)
- Evaluate, and interpret experimental data collected using a variety of biophysical and biochemical techniques, using simple physical models (Capability 1, 2, 3, 4 and 5)
|Tests, Quizzes, Exam||50%||Individual Coursework|
|Assessment Type||Learning Outcome Addressed|
|Tests, Quizzes, Exam|
Must achieve an overall passing mark (>50%) in the course.
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This course is a standard 15 point course and students are expected to spend 10 hours per week involved in each 15 point course that they are enrolled in.
For this course, you can expect 22 hours of lectures (11 x 2 hours), 50 hours of reading and thinking about the content and 90 hours of work on assignments and/or test preparation.
The course lectures and tutorials will not be recorded. Lecture slides and other learning materials will be posted to Canvas
Group discussions & tutorials will be held on campus. The course will not include live online events
The activities for the course are scheduled according to a standard weekly timetable
Course materials are made available in a learning and collaboration tool called Canvas which also includes reading lists and lecture recordings (where available).
Please remember that the recording of any class on a personal device requires the permission of the instructor.
There is no single textbook which is used throughout the course. Staff will discuss papers, and provide limited readings from textbooks as appropriate.
During the course Class Representatives in each class can take feedback to the staff responsible for the course and staff-student consultative committees.
At the end of the course students will be invited to give feedback on the course and teaching through a tool called SET or Qualtrics. The lecturers and course co-ordinators will consider all feedback.
Your feedback helps to improve the course and its delivery for all students.
Staff welcome feedback on the course throughout the semester, including the SET evaluations. Please contact your course coordinator or student representative at any time with your feedback.
The University of Auckland will not tolerate cheating, or assisting others to cheat, and views cheating in coursework as a serious academic offence. The work that a student submits for grading must be the student's own work, reflecting their learning. Where work from other sources is used, it must be properly acknowledged and referenced. This requirement also applies to sources on the internet. A student's assessed work may be reviewed against online source material using computerised detection mechanisms.
Class representatives are students tasked with representing student issues to departments, faculties, and the wider university. If you have a complaint about this course, please contact your class rep who will know how to raise it in the right channels. See your departmental noticeboard for contact details for your class reps.
The content and delivery of content in this course are protected by copyright. Material belonging to others may have been used in this course and copied by and solely for the educational purposes of the University under license.
You may copy the course content for the purposes of private study or research, but you may not upload onto any third party site, make a further copy or sell, alter or further reproduce or distribute any part of the course content to another person.
All students are asked to discuss any impairment related requirements privately, face to face and/or in written form with the course coordinator, lecturer or tutor.
Student Disability Services also provides support for students with a wide range of impairments, both visible and invisible, to succeed and excel at the University. For more information and contact details, please visit the Student Disability Services’ website http://disability.auckland.ac.nz
If your ability to complete assessed coursework is affected by illness or other personal circumstances outside of your control, contact a member of teaching staff as soon as possible before the assessment is due.
If your personal circumstances significantly affect your performance, or preparation, for an exam or eligible written test, refer to the University’s aegrotat or compassionate consideration page https://www.auckland.ac.nz/en/students/academic-information/exams-and-final-results/during-exams/aegrotat-and-compassionate-consideration.html.
This should be done as soon as possible and no later than seven days after the affected test or exam date.
In the event of an unexpected disruption, we undertake to maintain the continuity and standard of teaching and learning in all your courses throughout the year. If there are unexpected disruptions the University has contingency plans to ensure that access to your course continues and course assessment continues to meet the principles of the University’s assessment policy. Some adjustments may need to be made in emergencies. You will be kept fully informed by your course co-ordinator/director, and if disruption occurs you should refer to the university website for information about how to proceed.
The delivery mode may change depending on COVID restrictions. Any changes will be communicated through Canvas.
Student Charter and Responsibilities
The Student Charter assumes and acknowledges that students are active participants in the learning process and that they have responsibilities to the institution and the international community of scholars. The University expects that students will act at all times in a way that demonstrates respect for the rights of other students and staff so that the learning environment is both safe and productive. For further information visit Student Charter https://www.auckland.ac.nz/en/students/forms-policies-and-guidelines/student-policies-and-guidelines/student-charter.html.
Elements of this outline may be subject to change. The latest information about the course will be available for enrolled students in Canvas.
In this course students may be asked to submit coursework assessments digitally. The University reserves the right to conduct scheduled tests and examinations for this course online or through the use of computers or other electronic devices. Where tests or examinations are conducted online remote invigilation arrangements may be used. In exceptional circumstances changes to elements of this course may be necessary at short notice. Students enrolled in this course will be informed of any such changes and the reasons for them, as soon as possible, through Canvas.